GLECLUBS is an algorithm for predicting cis-regulatory binding sites in a prokaryotic genome, which was described in the following paper:

• Shaoqiang Zhang, Minli Xu, Shan Li, and Zhengchang Su. Genome-wide de novo prediction of cis-regulatory binding sites in prokaryotes. Nucleic Acids Research, 2009. doi:10.1093/nar/gkp248.
  

1. Recovery of known binding sites in RegulonDB for E. coli K12
   
2. Recovery of known binding sites in DBTBS for B. subtilis
   

eGLECLUBS is an extended version of GLECLUBS for simultaneously predicting binding sites in a group of closely related prokaryotic genomes, which was described in the following paper:

• Shaoqiang Zhang, Shan Li, Phuc T. Pham, and Zhengchang Su. Simultaneous prediction of cis-regulatory binding sites in a group of prokaryotic genomes. submitted.
  

1. eGLECLUBS: Click here to download the eGLECLUBS package and an example of a group of firmicutes
2. GLECLUBS: Click here to download the GLECLUBS package

• The project is funded by grants EF0849615 and CCI1048261 from National Science Foundation.